Large Language Models (LLMs) have been integrated into many applications (e.g., web agents) to perform more sophisticated tasks. However, LLM-empowered applications are vulnerable to Indirect Prompt Injection (IPI) attacks, where instructions are injected via untrustworthy external data sources. This paper presents Rennervate, a defense framework to detect and prevent IPI attacks. Rennervate leverages attention features to detect the covert injection at a fine-grained token level, enabling precise sanitization that neutralizes IPI attacks while maintaining LLM functionalities. Specifically, the token-level detector is materialized with a 2-step attentive pooling mechanism, which aggregates attention heads and response tokens for IPI detection and sanitization. Moreover, we establish a fine-grained IPI dataset, FIPI, to be open-sourced to support further research. Extensive experiments verify that Rennervate outperforms 15 commercial and academic IPI defense methods, achieving high precision on 5 LLMs and 6 datasets. We also demonstrate that Rennervate is transferable to unseen attacks and robust against adaptive adversaries.